PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT00560
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 1515aa    MW: 169691 Da    PI: 7.0559
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT00560genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.31.8e-1912091277259
                --SS-EEEEEEE--TT-SS-E........EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY    2 dDgynWrKYGqKevkgsefpr........sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                dDg++WrKYGqK++ gs++pr        +YYrCt++   gC++ k+++ ++ dp +++ +Y g+H+++
  EMT00560 1209 DDGFSWRKYGQKDILGSRNPRkadpssrrGYYRCTHHntrGCQALKQLQATDGDPLLFNAIYVGNHTCT 1277
                8******************96333333337******98999**************************97 PP

2WRKY81.58.7e-2613321392259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY    2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59  
                dDgy+W KYGqK++ gs++pr+YYrC ++   gC+++k+v+rs++d+++++++Y+geH++ 
  EMT00560 1332 DDGYSWSKYGQKDILGSKHPRGYYRCVHRpekGCEATKQVQRSDSDTQLFDVVYHGEHTCA 1392
                8***************************9999**************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147985.48E-10178274No hitNo description
SuperFamilySSF525404.03E-48334586IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009313.7E-46351612IPR002182NB-ARC
Gene3DG3DSA:3.40.50.3004.3E-14351487IPR027417P-loop containing nucleoside triphosphate hydrolase
PRINTSPR003648.8E-14370385No hitNo description
PRINTSPR003648.8E-14442456No hitNo description
PRINTSPR003648.8E-14520534No hitNo description
SuperFamilySSF520583.23E-216511016IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.7E-14672969IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003648.8E-14875891No hitNo description
Gene3DG3DSA:2.20.25.802.8E-2111951277IPR003657WRKY domain
SuperFamilySSF1182901.7E-1812021277IPR003657WRKY domain
PROSITE profilePS5081116.28312031274IPR003657WRKY domain
SMARTSM007748.0E-3112081278IPR003657WRKY domain
PfamPF031063.3E-1712091276IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-2613181392IPR003657WRKY domain
SuperFamilySSF1182902.88E-2313241392IPR003657WRKY domain
PROSITE profilePS5081122.11413261389IPR003657WRKY domain
SMARTSM007743.9E-3613311393IPR003657WRKY domain
PfamPF031064.9E-2513321391IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1515 aa     Download sequence    Send to blast
MADMRNFREV VQYLTGGVPA SDSIVQQLVG QGSASQTQDF QIVEAVEGLP RELLLSPSAA  60
VSPAARLASI ERSVRPVPAQ QPEVIDLTDD RFDDGGLVAV VDDDWLSLRC ASPPSPPPPE  120
STSGQFSPQG QKSAKQRSQT VSDISHSQVK QARQTKKRIQ QLQAPVCAMA DAMFRLPEKL  180
DGLLSSHGQM LPRGVEEEIP LIKQDLEKMV AILQQHDDSG AEDCAMTAKC LAKEVRELSY  240
DMEDSVDQYE QAATTSRWIA PRLKKHKFAR RRVTRLPEKL RWRLWMANKM REFSLRSQEA  300
LQRYSLFNHH GDNGIRAAAI GGTGSSTPPR HDTCFGSWYP TPYEELVGIG EHVNNLEAWL  360
GRDGEQRLKV VTVVGSGGIG KSTLVKELYR RIRGQFECRA FVRTSRKPDI RRLLISMLSQ  420
VRPHQTSHTW KLHSLIADIR THLQDKRYLI VIDDVWATQT WDIVSRALPD GNLCSGVLIT  480
TEIDDVALKC GGYDSKTAFG PQYECPPELS DVANNIIRKC AGFPLAVVTV AGLLVNQMGK  540
PEQWDFVNKS LGYGLRKNPA PEGMKQVLNL SYNNLRLHLK ACLMYLSIYE EDYIIQKNDL  600
VKQWIAEGFI HATEEKDMVE ISRICFDELI SSRMIEPVHI NDTGDVLSCT VHHMVLDFIT  660
HKSLEENFVT AIDHCQTTAR LADKVRRLSL HFGNAEATPP TNMRLSQVRT LAYFGVIKCL  720
PSIVEFGLLQ ILILHLWGDD DSISFDLTGI SELFRLRYLH VTCNATLEVP QTQIRGLRYL  780
ETLKIDARVS AVPSDIVHLP GLLHLSLPVE INLPNGIGRM TSLCTLECFD ISVNSVENVH  840
SLGELTNLHD LRLTCSTVHS CYLTSKMDSM CSILTKLSNL RSLTLEPSSI LDVGPSSMSI  900
SCDGLSSVSS PPACLQTFEW LPRICTFSSL PKWIGRLSKL CILKIGVRKL ANNDFDILRG  960
LPALTVLSLH IRTKPAKRIL FNKIGFSVLK YFKFRCRAPW LEFEVDAMPN LLKLKLRFDA  1020
HGVDQHGTIP VGIVHLTGLK EMSAKIGGAG ANDPDRRAAE SALIDAIKMH PACPTLSIHC  1080
LDAMFSGEDD DIKKEDSIEH MTLQKQYDVK KEDSIEHMTL QKQYGIKKED SIEHTTLQEQ  1140
YDIKNEDLIE HMTLQIQNDI KKEDSYKQHG FLQKDYRYDA NKHAVIRKTL PKWSTQVRVS  1200
SLQDIEGHDD GFSWRKYGQK DILGSRNPRK ADPSSRRGYY RCTHHNTRGC QALKQLQATD  1260
GDPLLFNAIY VGNHTCTQGA NSQPQPGYEQ SSISVGDKAE GSIQRLEKMP PRRSKRSIQV  1320
RVRSMQDDYP ADDGYSWSKY GQKDILGSKH PRGYYRCVHR PEKGCEATKQ VQRSDSDTQL  1380
FDVVYHGEHT CAENVHSRGE SARSLPHHVS VSAGVIPPAT SESQVTYEAV SSGSTAGIHF  1440
MSPATSAGSQ VTYESGSRST TTGRFISPGM SESQVAYAEF WTWPDNVDFM LNSPINERLD  1500
LNADFVDETG PSDFD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1959310.0KF195931.1 Triticum aestivum WRKY transcription factor 41 (WRKY41) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616920.10.0PREDICTED: putative disease resistance RPP13-like protein 3 isoform X4
TrEMBLR7VZB50.0R7VZB5_AEGTA; Putative disease resistance RPP13-like protein 2
STRINGMLOC_74974.50.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.26e-29WRKY family protein